Before Trimming
Reads #: 2000000
Total bases: 200000000
Reads Length: 100.00

After Trimming
Reads #: 1972635 (98.63 %)
Total bases: 195946714 (97.97 %)
Mean Reads Length: 99.33
  Paired Reads #: 1954404 (99.08 %)
  Paired total bases: 194059653 (99.04 %)
  Unpaired Reads #: 18231 (0.92 %)
  Unpaired total bases: 1887061 (0.96 %)

Discarded reads #: 27365 (1.37 %)
Trimmed bases: 4053286 (2.03 %)
  Reads Filtered by length cutoff (50 bp): 26089 (1.30 %)
  Bases Filtered by length cutoff: 602583 (0.30 %)
  Reads Filtered by continuous base "N" (2): 1270 (0.06 %)
  Bases Filtered by continuous base "N": 125675 (0.06 %)
  Reads Filtered by low complexity ratio (0.8): 6 (0.00 %)
  Bases Filtered by low complexity ratio: 600 (0.00 %)
  Reads Trimmed by quality (5.0): 148776 (7.44 %)
  Bases Trimmed by quality: 3044709 (1.52 %)
  Reads Trimmed with Adapters/Primers: 7418 (0.37 %)
  Bases Trimmed with Adapters/Primers: 279719 (0.14 %)
    Nextera-primer-adapter-1 7270 reads (0.36 %) 272839 bases (0.14 %)
    Nextera-primer-adapter-2 148 reads (0.01 %) 6880 bases (0.00 %)