Before Trimming
Reads #: 4589774
Total bases: 165231864
Reads Length: 36.00

After Trimming
Reads #: 4363656 (95.07 %)
Total bases: 156398472 (94.65 %)
Mean Reads Length: 35.84

Discarded reads #: 226118 (4.93 %)
Trimmed bases: 8833392 (5.35 %)
  Reads Filtered by length cutoff (20 bp): 68065 (1.48 %)
  Bases Filtered by length cutoff: 626136 (0.38 %)
  Reads Filtered by continuous base "N" (2): 104727 (2.28 %)
  Bases Filtered by continuous base "N": 3686831 (2.23 %)
  Reads Filtered by low complexity ratio (0.8): 53326 (1.16 %)
  Bases Filtered by low complexity ratio: 1903712 (1.15 %)
  Reads Trimmed by quality (5.0): 327035 (7.13 %)
  Bases Trimmed by quality: 2616713 (1.58 %)
  Reads Trimmed with Adapters/Primers: 0 (0.00 %)
  Bases Trimmed with Adapters/Primers: 0 (0.00 %)