FastQCFastQC Report
Thu 15 Aug 2019
SRR6322567_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6322567_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1795874
Sequences flagged as poor quality0
Sequence length251
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGGGCCCA100000.556831938098107No Hit
GTTCGCGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGG75410.41990696451978254No Hit
GCGGGCAGAACCGTTTTAACCGACGCACGGCATAGCTAACCGGTGGCGCA68430.3810400952405347No Hit
CAATGATATTGCTACTTTAGATGAAAAACAATGAAACAAGTCAAGGAAGA67980.3785343515190932No Hit
GCCCAATGATATTGCTACTTTAGATGAAAAACAATGAAACAAGTCAAGGA59880.3334309645331465No Hit
CTGCTACATGCGGCTCTACACCCATAGCCGATTTATTTAAAATTCGCTGC54550.3037518222325174No Hit
CTCGACATTGCTTTTCGCGCATGCGGTGCACCTCGGAGGCTCGGCTCCGT49120.2735158479937902No Hit
CCTGCATGTAGATCCCTATAAGCCATGTTTTGTTCCAGAACCTGTTCAGG48090.26778047903137975No Hit
CGGGCAGAACCGTTTTAACCGACGCACGGCATAGCTAACCGGTGGCGCAT47250.2631030907513556No Hit
CGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGGACCGG41110.22891360975213185No Hit
TCTCGACATTGCTTTTCGCGCATGCGGTGCACCTCGGAGGCTCGGCTCCG32820.18275224208379875No Hit
CCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGGGCCCAG30680.17083603860849927No Hit
CGCGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGGACC29240.1628176586998865No Hit
CGCCCAATGATATTGCTACTTTAGATGAAAAACAATGAAACAAGTCAAGG25930.1443865215488392No Hit
CCCAATGATATTGCTACTTTAGATGAAAAACAATGAAACAAGTCAAGGAA23750.13224758529830044No Hit
CTTCTAACTCACACCAAAAAGAGGCGAGATCACATGGCATCATTGAGCAA23480.13074413906543556No Hit
CCCTGCTACATGCGGCTCTACACCCATAGCCGATTTATTTAAAATTCGCT21740.12105526334252849No Hit
TCGCGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGGAC20020.11147775400724104No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)